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- # Makefile variables useful for third-party code using htslib's public API.
- #
- # Copyright (C) 2013-2014 Genome Research Ltd.
- #
- # Author: John Marshall <jm18@sanger.ac.uk>
- # These variables can be used to express dependencies on htslib headers.
- # See htslib.mk for details.
- htslib_bgzf_h = $(HTSPREFIX)htslib/bgzf.h
- htslib_faidx_h = $(HTSPREFIX)htslib/faidx.h
- htslib_hfile_h = $(HTSPREFIX)htslib/hfile.h $(htslib_hts_defs_h)
- htslib_hts_h = $(HTSPREFIX)htslib/hts.h
- htslib_hts_defs_h = $(HTSPREFIX)htslib/hts_defs.h
- htslib_sam_h = $(HTSPREFIX)htslib/sam.h $(htslib_hts_h)
- htslib_synced_bcf_reader_h = $(HTSPREFIX)htslib/synced_bcf_reader.h $(htslib_hts_h) $(htslib_vcf_h) $(htslib_tbx_h)
- htslib_tbx_h = $(HTSPREFIX)htslib/tbx.h $(htslib_hts_h)
- htslib_vcf_h = $(HTSPREFIX)htslib/vcf.h $(htslib_hts_h) $(HTSPREFIX)htslib/kstring.h
- htslib_vcf_sweep_h = $(HTSPREFIX)htslib/vcf_sweep.h $(htslib_hts_h) $(htslib_vcf_h)
- htslib_vcfutils_h = $(HTSPREFIX)htslib/vcfutils.h $(htslib_vcf_h)
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